| structure name | CRYSTAL STRUCTURE OF THE SALMONELLA TRANSCRIPTIONAL REGULATOR SLYA IN COMPLEX WITH DNA (Transcriptional regulator slyA) |
| reference | Duguid et al. J.Biol.Chem. 286 22178 2011 |
| source | Salmonella enterica |
| experiment | X-ray (resolution=2.96, R-factor=0.219) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | MarR family; |
| multimeric complexes | 3q5f_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | EQPSVRR |
Estimated binding specificities ?
| readout + contact |  |
A | 78 6 24 24 6 0 96 6 0 6 C | 6 6 24 24 6 0 0 6 96 6 G | 6 6 24 24 6 0 0 78 0 6 T | 6 78 24 24 78 96 0 6 0 78scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: SLYA | ||
| TTAGCAAGCTAA | PubMed | 3q5f_A(9.12e-04) |
Dendrogram of similar interfaces ?
matrix format----RGSTRTSTHG------RA---- L +-----------------------------3zpl_B +-1 --DCLT--AGTTRG--RG--RA---- L +-2 +-----------------------------5h3r_A ! ! TT----KATTQTTGLTRTKA--FTYT L --3 +-----------------------------2p7c_B ! --------------YG---------- +-----------------------------3eyi_B |
home
updated Sun Aug 3 07:23:56 2025