| structure name | CRYSTAL STRUCTURE OF THE SALMONELLA TRANSCRIPTIONAL REGULATOR SLYA IN COMPLEX WITH DNA (Transcriptional regulator slyA) |
| reference | Duguid et al. J.Biol.Chem. 286 22178 2011 |
| source | Salmonella enterica |
| experiment | X-ray (resolution=2.96, R-factor=0.219) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | MarR family; |
| multimeric complexes | 3q5f_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | EQPSVRR |
Estimated binding specificities ?
| readout + contact |  |
A | 86 0 6 0 96 80 24 24 60 11 C | 5 0 75 0 0 5 24 24 6 10 G | 5 96 10 0 0 6 24 24 25 10 T | 0 0 5 96 0 5 24 24 5 65scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: SLYA | ||
| TTAGCAAGCTAA | PubMed | 3q5f_A(9.12e-04) |
Dendrogram of similar interfaces ?
matrix format----RGSTRTSTHG--------RA---- L +---------------3zpl_B +-----2 --DCLT--AGTTRG--RG----RA---- L ! ! +5h3r_A +-------3 +---------------1 ------------RCYG----KT------ ! ! +2acj_B --4 ! TT----KATTQTTGLTRTKA----FTYT L ! +---------------------2p7c_B ! --------------YG------------ +-----------------------------3eyi_B |
home
updated Sat Jan 10 06:23:41 2026