interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT BOUND TO DNA AND DDATP-DT IN CLOSED CONFORMATION
(DNA POLYMERASE I)
referenceBeese et al.
sourceGEOBACILLUS
experimentX-ray (resolution=1.61, R-factor=0.195)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNRQH

Estimated binding specificities ?

readout + contactlogo
# IC=2.726 IC/col=0.389 n_of_columns=7 specificity:   
A |  17  24  24  87  10  24  10
C |  52  24  24   1  78  24  78
G |  19  24  24   8   8  24   0
T |   8  24  24   0   0  24   8
scan!

home
updated Thu Sep 12 18:21:28 2024