4auw_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE (TRANSCRIPTION FACTOR MAFB)
reference	Textor et al. 'Acta 63 657 2007
source	MUS MUSCULUS
experiment	X-ray (resolution=2.90, R-factor=0.257)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;Leucine zipper domain;
sequence family	bZIP Maf transcription factor;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4auw_B interface=32,36,39,40,43,44, ddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvk
interface signature	RNYACR

Estimated binding specificities ?

readout + contact

# IC=8.696 IC/col=0.512 n_of_columns=17

specificity:

A |   0  89  24  24  24  24  24  24  24  13   0   0  24  61   0   0  75
C |   7   0  24  24  24  24  24  24  24  57   0   0  24  16   0  96   6
G |   0   6  24  24  24  24  24  24  24  13  96   0  24   6  96   0   9
T |  89   1  24  24  24  24  24  24  24  13   0  96  24  13   0   0   6

scan!

home
updated Mon Dec 16 22:46:36 2024