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legend  pdf

structure nameSTRUCTURE OF THE HIGH FIDELITY DNA POLYMERASE I WITH THE OXIDATIVE FORMAMIDOPYRIMIDINE-DA DNA LESION IN THE PRE-INSERTION SITE.
(DNA POLYMERASE I)
referenceSchneider et al. Nat.Chem.Biol. 9 455 2013
sourceGEOBACILLUS STEAROTHERMOPHILUS
experimentX-ray (resolution=2.05, R-factor=0.191)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNYQH

Estimated binding specificities ?

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# IC=2.674 IC/col=0.669 n_of_columns=4 specificity:   
A |   9   9   9   0
C |  69   9  67   0
G |   9  11  11   0
T |   9  67   9  96
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updated Thu Sep 12 18:48:57 2024