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legend  pdf

structure nameSTRUCTURE OF THE HIGH FIDELITY DNA POLYMERASE I WITH THE OXIDATIVE FORMAMIDOPYRIMIDINE-DA DNA LESION IN THE PRE-INSERTION SITE.
(DNA POLYMERASE I)
referenceSchneider et al. Nat.Chem.Biol. 9 455 2013
sourceGEOBACILLUS STEAROTHERMOPHILUS
experimentX-ray (resolution=2.05, R-factor=0.191)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNYQH

Estimated binding specificities ?

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# IC=3.614 IC/col=0.723 n_of_columns=5 specificity:   
A |  85   5  10   5   0
C |   0  80  17  64   0
G |   5   5  21   5   0
T |   6   6  48  22  96
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updated Mon Dec 16 22:47:31 2024