interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 11 BASE PAIRS OF DUPLEX DNA AFTER ADDITION OF TWO DATP RESIDUES
(PROTEIN DNA POLYMERASE I)
referenceKiefer et al.
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.80, R-factor=0.248)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRYQH

Estimated binding specificities ?

contactlogo
# IC=2.635 IC/col=0.659 n_of_columns=4 specificity:   
A |  11  11  67  96
C |   9  67  11   0
G |  67   9   9   0
T |   9   9   9   0
scan!

home
updated Thu Sep 12 18:50:38 2024