interface graph thumbnail
legend  pdf

structure nameTERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND DCTP (PAIRED WITH DG OF TEMPLATE)
(DNA polymerase I)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.69, R-factor=0.159)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

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# IC=2.714 IC/col=0.679 n_of_columns=4 specificity:   
A |  10  34   0  17
C |   8  17   0   0
G |  78  28  96  10
T |   0  17   0  69
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updated Thu Sep 12 19:00:04 2024