interface graph thumbnail
legend  pdf

structure nameTERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MG2+
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.59, R-factor=0.161)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNRH

Estimated binding specificities ?

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# IC=3.184 IC/col=0.796 n_of_columns=4 specificity:   
A |  57   0  13   0
C |  13  96  13  96
G |  13   0  13   0
T |  13   0  57   0
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updated Sat Aug 2 06:00:57 2025