4dqr_A : 3D-footprint complex

structure name	TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT E658A, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MN2+ (DNA polymerase)
reference	Beese et al.
source	Geobacillus kaustophilus
experiment	X-ray (resolution=1.95, R-factor=0.167)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4dqr_A interface=286,319,326,329,333,501,533, akmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqialrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak
interface signature	KRNNRQH

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# IC=3.637 IC/col=0.520 n_of_columns=7

A |  22  24  24  89   7  14   7
C |  66  24  24   0  81  16  89
G |   8  24  24   7   1  22   0
T |   0  24  24   0   7  44   0

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updated Mon Dec 16 23:01:07 2024