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legend  pdf

structure nameBINARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT AND DUPLEX DNA WITH RC IN PRIMER TERMINUS PAIRED WITH DG OF TEMPLATE
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.66, R-factor=0.161)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNAFYISLNQ

Estimated binding specificities ?

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# IC=3.101 IC/col=0.517 n_of_columns=6 specificity:   
A |   0   0  16  24  24  13
C |  96   0  13  24  24  13
G |   0  96  13  24  24  54
T |   0   0  54  24  24  16
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updated Thu Sep 12 19:00:42 2024