interface graph thumbnail
legend  pdf

structure nameTERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND RCTP IN PRESENCE OF MG2+
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.68, R-factor=0.177)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNRENQH

Estimated binding specificities ?

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# IC=3.648 IC/col=0.730 n_of_columns=5 specificity:   
A |  75   0   9   0   0
C |   6  84  13  90  75
G |   9   6  20   0  20
T |   6   6  54   6   1
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updated Sun Jun 28 09:42:06 2026