4ds5_D : 3D-footprint complex

structure name	TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT, DNA DUPLEX, AND RCTP IN PRESENCE OF MG2+ (DNA polymerase)
reference	Beese et al.
source	Geobacillus kaustophilus
experiment	X-ray (resolution=1.68, R-factor=0.177)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A;
multimeric complexes	8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex	4yfu_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ds5_D interface=287,320,327,330,334,363,478,482,514, lakmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladpqfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaakmkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwelerpfldelrrneqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefninspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgKlqstyiegllkvvrpatkkvhtifnqaltqtgRlsstepNlqNipiRleegrkirqafvpsesdwlifaadysqiElrvlahiaeddnlmeafrrdldihtktkavnfgivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamNtpiQgsaadiikkamidlnarlkeerlqahlllqvHdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak
interface signature	KRNNRENQH

readout + contact

# IC=4.475 IC/col=0.895 n_of_columns=5

A |  54   0  13   0   0
C |  13  96  13  96  96
G |  16   0  13   0   0
T |  13   0  57   0   0

home
updated Thu Sep 12 19:00:59 2024