interface graph thumbnail
legend  pdf

structure nameTERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENT F710Y, DNA DUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE OF MG2+
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.67, R-factor=0.176)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

contactlogo
# IC=2.849 IC/col=0.712 n_of_columns=4 specificity:   
A |   8  48   0   8
C |   0  24   0   8
G |  80   8  96   8
T |   8  16   0  72
scan!

home
updated Sat Aug 2 06:01:45 2025