interface graph thumbnail
legend  pdf

structure nameBACILLUS DNA POLYMERASE I LARGE FRAGMENT COMPLEX 1
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.64, R-factor=0.172)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNRAYYINNQH

Estimated binding specificities ?

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# IC=3.142 IC/col=0.786 n_of_columns=4 specificity:   
A |   0  54   0  13
C |   0  13   0  13
G |  96  13  96  13
T |   0  16   0  57
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updated Thu Sep 12 19:12:00 2024