interface graph thumbnail
legend  pdf

structure nameDNA POLYMERASE I LARGE FRAGMENT COMPLEX 5
(DNA polymerase)
referenceBeese et al.
sourceGeobacillus kaustophilus
experimentX-ray (resolution=1.57, R-factor=0.180)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNQH

Estimated binding specificities ?

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# IC=2.849 IC/col=0.712 n_of_columns=4 specificity:   
A |  72   0  24   8
C |   8  96  16  80
G |   8   0   8   8
T |   8   0  48   0
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updated Sat Aug 2 06:15:29 2025