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structure nameCRYSTAL STRUCTURE OF THE SV40 LARGE T-ANTIGEN ORIGIN BINING DOMAIN BOUND TO SITE I DNA
(Large T antigen)
referenceBullock et al. J.Virol. 87 2923 2013
sourceSimian virus 40
experimentX-ray (resolution=3.20, R-factor=0.191)
structural superfamilyOrigin of replication-binding domain, RBD-like;
sequence familyOrigin of replication binding protein;
multimeric complexes2itl_AB 2ntc_AB 4fgn_AB 5d9i_AB
reference complex2itl_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSNRTRR

Estimated binding specificities ?

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# IC=6.641 IC/col=0.949 n_of_columns=7 specificity:   
A |   9   0  67   9   0   0   1
C |   9   0  11   9   0  96  86
G |  69  96   9  78  96   0   9
T |   9   0   9   0   0   0   0
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updated Thu Sep 12 19:15:01 2024