| structure name | HUMAN TFIIB-RELATED FACTOR 2 (BRF2) AND TBP BOUND TO U6#2 PROMOTER (TATA-BOX-BINDING PROTEIN) |
| reference | Guthertz et al. 'Cell(Cambridge,Mass.)' 163 1375 2015 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=1.90, R-factor=0.187) |
| structural superfamily | TATA-box binding protein-like; |
| sequence family | Transcription factor TFIID or TATAbinding; |
| redundant complexes | 5n9g 1tgh 4rod 4roe 1cdw 1nvp 1jfi 1c9b |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | NVFLFVTNVFPLFVT |
Estimated binding specificities ?
| contact |  |
A | 0 0 67 96 96 67 0 69 C | 0 0 9 0 0 11 0 9 G | 0 0 9 0 0 9 0 9 T | 96 96 11 0 0 9 96 9scan! |
Dendrogram of similar interfaces ?
matrix formatNTVAFT--LTFAVATT--NAVTFAPALAFTVATA-- L +-----------------------------1vto_B +-6 NTVAFG--LTFAVA----NAVTFAPALTFTVATA-- L ! +-----------------------------5iyd_P ! NTVTFA--LAFTVATT--NAVTFTPALTFAVTTA-- L ! +4roc_B ! +-1 NAVTFTPALTFAVATA--NTVTFTPALTFAVAST-- L --7 +--------2 +1ais_A ! ! ! NAVTFT--LTFAVATA--NTVTFAPALAFTVATA-- L ! +------------3 +1ytb_A ! ! ! NTVTFT--LTFAVATT--NAVTFTPALTFAVATA-- L ! +----4 +---------1qna_B ! ! ! NTVAFA--LAFTVGTTQGNTVAFAPALAFTVATT-- L +-5 +----------------------6cnc_R ! ----------------------------------RT +---------------------------6mup_M |
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updated Tue Dec 17 00:15:11 2024