| structure name | CRYSTAL STRUCTURE OF HUMAN HSF1 WITH SATELLITE III REPEAT DNA (Heat shock factor protein 1) |
| reference | Hayer-Hartl et al. Nat.Struct.Mol.Biol. 23 140 2016 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.55, R-factor=0.192) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | HSFtype DNAbinding; |
| multimeric complexes | 5d5v_BD |
| redundant complexes |  5d5u_B
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SVRQNMR |
Estimated binding specificities ?
| contact |  |
A | 9 0 0 96 67 24 9 C | 9 0 0 0 9 24 9 G | 11 96 96 0 11 24 69 T | 67 0 0 0 9 24 9scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: HSF1 | ||
| CCAAT | PubMed | 5d5v_BD(1.81e-03) |
| AGAACGTTCTAGAAC | PubMed | 5d5u_B(1.27e-02) |
Dendrogram of similar interfaces ?
matrix format----ECKTRGHTRA L +---4mhg_A +-1 ------KTRGYT-- L +-------------------2 +---4bqa_A ! ! ------KTRGYA-- L --3 +-----4l18_B ! ITSCSGKG------ L +-------------------------5i2d_R |
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updated Tue Dec 19 10:13:28 2023