interface graph thumbnail
legend  pdf

structure nameTFIIIB -TBP/BRF2/DNA AND SANT DOMAIN OF BDP1-
(TATA-BOX-BINDING PROTEIN)
referenceGuthertz et al. 'Nat 8 130 2017
sourceHOMO SAPIENS
experimentX-ray (resolution=2.70, R-factor=0.196)
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes5n9g_AC 5n9g_FH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=7.965 IC/col=0.996 n_of_columns=8 specificity:   
A |   0   0  67  96  96  67   0  67
C |   0   0   9   0   0  11   0   9
G |   0   0  11   0   0   9   0   9
T |  96  96   9   0   0   9  96  11
scan!

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updated Sun Aug 3 09:38:35 2025