Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameSTRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR
experimentNMR
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;
sequence familyHelicase conserved Cterminal domain; Type III restriction enzyme, res subunit;
multimeric complexes5oqm_7AMOQRU 5oqm_EW
links to other resourcesNAKB PDBSum PDIdb DNAproDB

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----LC------------------------------             +-----------------------------5iy6_V    
                                                   ! 
  EC----------------ITFT----TTIA--RG--   L       +-4                              +7oo3_b    
                                                 ! ! +----------------------------1 
  ----------------------SC------RG----   L       ! ! !                            +6kw4_Y    
                                                 ! +-3 
  --ET----RGSG------------------IC--KC   L     +-5   !                          +-7aud_E    
                                               ! !   +--------------------------2 
  ----------------TA------------------   L     ! !                              +-3kqh_B    
                                             +-6 ! 
  --------------------KG--SG----------       ! ! +-----------------------------7amv_W    
                                           --7 ! 
  ------MT----------------------------       ! +-----------------------------5sva_Z    
                                             ! 
  ------------FAKAQG------------------   L   +-----------------------------8btg_B    
                                           

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updated Mon Jun 29 20:53:10 2026