| structure name | MEDIATOR-RNA POLYMERASE II PRE-INITIATION COMPLEX (DNA REPAIR HELICASE RAD25) |
| source | SACCHAROMYCES CEREVISIAE |
| experiment | NMR |
| structural superfamily | P-loop containing nucleoside triphosphate hydrolases; |
| sequence family | Helicase conserved Cterminal domain; Type III restriction enzyme, res subunit; |
| multimeric complexes | 5sva_AZcdfjn 5sva_Bg 7k04_7A 7ml0_7AMOQRWX 7ml2_7MORU 7zs9_257AMOQRUWXabcdefgh 7zsa_7ABMOQRUWXabcdefgh 7zsb_7ABMOQRUWXabcdefgh |
| redundant complexes | 7k04 7ml0 7ml2 7zs9 7zsa 7zsb |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format----MT------------------------------------------------ +5sva_Z +------------------1 ----MT------------------------------------------------ +----3 +5fmf_1 ! ! ------HG----------------------------------KC--HA------ +--4 +------------------6ro4_A ! ! ------------------DC------------------YT------YA----YT +-7 +-----------------------6p4f_C ! ! --------EG-------------------------------------------- +-8 +--------------------------6iy2_O ! ! ------------------------------------------RT----DAWA-- +-10 +---------------------------5vvr_M ! ! ----------RT------------------------------------------ +-11 +---------------------------6jyl_K ! ! ----------------------VT--------------------------WA-- +-12 +----------------------------6pwf_K ! ! --------------------NT------------------QT------------ ! +----------------------------6ne3_W +-13 --RG------QCQC------------------YGDG------IC---------- L ! ! +---------------------------5n8r_B ! ! ! ------------------------------------------IC----KC---- ! ! ! +----------4o3m_A ! +-9 +------------2 ------------------------KGCGNCSG----KG------DG--RG---- L -14 ! +--5 +----------6crm_A ! ! ! ! --RC------HC----QT------------------------------------ ! +-6 +-----------------------6m6b_M ! ! ------------------------------------------------PG---- L ! +--------------------------5v9x_A ! HT------------RT-------------------------------------- L +-----------------------------5fhd_A |
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updated Tue Dec 19 11:14:37 2023