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legend  pdf

structure nameMBD2 IN COMPLEX WITH DOUBLE-STRANDED DNA
(Methyl-CpG-binding domain protein 2)
referenceStructural Genomics Consortium (SGC)
sourceHomo sapiens
experimentX-ray (resolution=2.30, R-factor=0.234)
structural superfamilyDNA-binding domain;
sequence familyMethylCpG binding domain;
multimeric complexes6c1a_AB 6c1a_EF 6c1t_AD 6c1u_AB 6c1u_EF 6c1v_AB 6c1v_EF
reference complex6c1t_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRDYKR

Estimated binding specificities ?

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# IC=2.155 IC/col=0.539 n_of_columns=4 specificity:   
A |  42  12   0   9
C |  18  12   0   9
G |  18  60   0  67
T |  18  12  96  11
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updated Thu Sep 12 22:54:54 2024