interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF THE TN1549 TRANSPOSON INTEGRASE (AA 82-397, R225K) IN COMPLEX WITH CIRCULAR INTERMEDIATE DNA (CI5-DNA)
(Int protein)
referenceRubio-Cosials et al. Cell 173 208 2018
sourceEnterococcus faecalis
experimentX-ray (resolution=2.79, R-factor=0.199)
structural superfamilyDNA breaking-rejoining enzymes;
sequence familyPhage integrase family;
multimeric complexes6emz_AB 6en0_AB 6en1_AB 6en2_AB
reference complex6en1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNTRKTNRSYTAVDRN

Estimated binding specificities ?

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# IC=9.838 IC/col=0.820 n_of_columns=12 specificity:   
A |   0  96  96  96  96  11  11  67   8  59  24   0
C |   0   0   0   0   0   8  11   8  11   8  24   0
G |  96   0   0   0   0  13  12  10  13  15  24  96
T |   0   0   0   0   0  64  62  11  64  14  24   0
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updated Thu Sep 12 23:12:59 2024