Estimated binding specificities ?

structure nameTFAM BOUND TO SITE-X
(Transcription factor A, mitochondrial)
referenceFernandez-Millan et al. 'Nucleic 47 6519 2019
sourceHomo sapiens
experimentX-ray (resolution=3.10, R-factor=0.190)
structural superfamilyHMG-box;
sequence familyHMG high mobility group box;
multimeric complexes3tq6_AB 6erp_ACF 6erp_BGJ 6erq_ACF 6erq_BGJ 6hb4_ADGJ 6hc3_ADGJ 7lbw_AB
reference complex3tq6_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
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# IC=11.754 IC/col=0.653 n_of_columns=18 specificity:   
A |   8   0   0   0   0   0  24  24  24  24  24  24  24   8   0   0   0   8
C |  16   0   0   0   0   0  24  24  24  24  24  24  24  24   0   0   0  16
G |   8  96  96   0  96  96  24  24  24  24  24  24  24   8   0  96   0   8
T |  64   0   0  96   0   0  24  24  24  24  24  24  24  56  96   0  96  64
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updated Mon Dec 18 15:22:45 2023