3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF DOT1L BOUND TO H2B UBIQUITINATED NUCLEOSOME
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6jma_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  --RT                             +---------7jzv_N    
               +-------------------2 
  --RC         !                   !     +---6qld_f    
             +-3                   +-----1 
  LC--       ! !                         +---8bvw_e    
           --4 ! 
  --RT       ! +-----------------------------8com_C    
             ! 
  --RT       +-----------------------------7on1_e

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updated Wed Dec 18 04:12:01 2024