interface graph thumbnail
legend  pdf

structure nameBST DNA POLYMERASE I FANA/DNA BINARY COMPLEX
(DNA polymerase I)
referenceJackson et al. 'Nucleic 47 6973 2019
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.62, R-factor=0.188)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKNFY

Estimated binding specificities ?

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# IC=1.831 IC/col=0.366 n_of_columns=5 specificity:   
A |  38  12   7  21   4
C |  19  60   7  23   4
G |  19  12  75  21   4
T |  20  12   7  31  84
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updated Fri Sep 13 01:06:47 2024