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structure nameDIHEDRAL OLIGOMERIC COMPLEX OF GYRA N-TERMINAL FRAGMENT WITH DNA, SOLVED BY CRYOEM IN C2 SYMMETRY
(DNA GYRASE SUBUNIT A)
sourceSTREPTOCOCCUS PNEUMONIAE G54
experimentNMR
structural superfamilyType II DNA topoisomerase;
sequence familyDNA gyrase/topoisomerase IV, subunit A;
multimeric complexes4z2c_AD 4z2c_BC 4z2d_ABCD 4z2e_AD 4z2e_BC 6n1p_ABDFGH
redundant complexes4z2c 4z2d 4z2e
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----------------------------------------------LAECDAKG                                        +6n1p_A    
                                                                                                ! 
  YC----------SG------------------RT----IG--------------                                      +-3   +5iwi_C    
                                                                                              ! ! +-1 
  YT----------ST--------------------RA--IG--------------                                      ! +-2 +5bs8_A    
                                                                                            +-4   ! 
  ------------SA------------------RG----IG--QT----------   L                                ! !   +5npk_d    
                                                                                        +---5 ! 
  ------------SA------------------RG----IG--------------                                !   ! +2xcr_U    
                                                                                   +----6   ! 
  ----RC------AT------------------------IC----RG--------   L                       !    !   +2xkk_C    
                                                                                +--8    ! 
  ----RC------ST------------------------IA--------------                        !  !    +----3ksb_B    
                                                                  +-------------9  ! 
  ----------QAAG------------------------IGAG------------   L      !             !  +---------5zen_A    
                                                               +-10             ! 
  --DC--------------------------------ECIGSG------------   L   !  !             +------------4fm9_A    
                                                               !  !  
  --------RC--------------------------------------------     -11  +--------------------------7cow_T    
                                                               !  
  --------------NAST--RGHTST----------------------------   L   !                       +-----3g73_A    
                                                               +-----------------------7 
  ------TT--KATT--QTTG------LTRTKA----------------------   L                           +-----2p7c_B    
                                                             

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updated Tue Dec 19 13:47:43 2023