6sje_C : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE RECBCD CHI PARTIALLY-RECOGNISED COMPLEX (RECBCD ENZYME SUBUNIT RECC)
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;Restriction endonuclease-like;
sequence family	Exodeoxyribonuclease V, gamma subunit;
multimeric complexes	1w36_BC 1w36_EF 3k70_BCD 3k70_EFG 5ld2_BCD 6sjb_BCD 6sje_BCD 6sjf_BCD 6sjg_BCD 6t2u_BCD 6t2v_BCD 7mr3_BC 7mr4_BC 8b1t_BCD 8b1u_BCD
reference complex	6sjf_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6sje_C interface=37,39,40,43,62,63,64,65,66,67,70,84,88,133,136,137,140,141,186,443,492,650,651,652,653,663,664,665,666,685,706,708,712,715,875,878,879,882,1073,1078,1079,1080,1081,1082, mlrvyhsnrldvlealmefivererlddpfepemilVqSTgmAqwlqmtlsqkfgiaanidFPLPASfiWdmfvrvlpeipkeSafnKqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaaDlfDQylVYrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhRanlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrRarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrYlrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerISQRflagpvnicTLMPmrsipfkvvcllgmndgvYprqlaplgfdlmsqkpkrgdRsRrddDryLflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfilegLsrYQinQqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq
interface signature	VSTAFPLPASWSKDDQVYRRYISQRTLMPYRRDLLYQQQNMMVR

Estimated binding specificities ?

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# IC=17.252 IC/col=0.308 n_of_columns=56

specificity:

A |   0   9   4   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  19   0  24  24  24  24  24  24  24  24   0   0   0   0   0   0   0   0   0
C |   0   9   7   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  19  96  24  24  24  24  24  24  24  24   0  96   0   0   0   0   0   0   0
G |   0  11   4  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  19   0  24  24  24  24  24  24  24  24  96   0   0  96  96   0  96  96   0
T |  96  67  81   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  39   0  24  24  24  24  24  24  24  24   0   0  96   0   0  96   0   0  96

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updated Fri Sep 13 02:04:35 2024