interface graph thumbnail
legend  pdf

structure nameDNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE AND PRIMER CONTAINING AN N3'-> P5' LINKAGE
(DNA polymerase I)
referenceLelyveld et al. Proc.Natl.Acad.Sci.USA 117 7276 2020
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.27, R-factor=0.231)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNRYQH

Estimated binding specificities ?

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# IC=3.142 IC/col=0.786 n_of_columns=4 specificity:   
A |  13  57   0   0
C |  54  13   0   0
G |  16  13  96  96
T |  13  13   0   0
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updated Tue Dec 17 07:25:14 2024