interface graph thumbnail
legend  pdf

structure nameDNA POLYMERASE I LARGE FRAGMENT FROM BACILLUS STEAROTHERMOPHILUS WITH DNA TEMPLATE AND PRIMER CONTAINING AN N3'-> P5' LINKAGE
(DNA polymerase I)
referenceLelyveld et al. Proc.Natl.Acad.Sci.USA 117 7276 2020
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.27, R-factor=0.231)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNRYQH

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |   0   0  13  13
C |   0  96  13  16
G |  96   0  16  54
T |   0   0  54  13
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updated Fri Sep 13 02:26:37 2024