interface graph thumbnail
legend  pdf

structure nameBST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 1 MIN POST DATP ADDITION
(DNA polymerase I)
referenceChaput et al. 'Nat 12 2641 2021
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=2.16, R-factor=0.188)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNYI

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  96  13   0  13
C |   0  54   0  13
G |   0  16  96  16
T |   0  13   0  54
scan!

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updated Tue Dec 17 09:29:29 2024