interface graph thumbnail
legend  pdf

structure nameBST DNA POLYMERASE I TIME-RESOLVED STRUCTURE, 4 MIN POST DATP ADDITION
(DNA polymerase I)
referenceChaput et al. 'Nat 12 2641 2021
sourceGeobacillus stearothermophilus
experimentX-ray (resolution=1.97, R-factor=0.220)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A;
multimeric complexes8scg_AD 8sci_AD 8scj_AD 8sck_AD 8scl_AD 8scm_AD 8scn_AD 8sco_AD 8scp_AD 8scr_AD 8scs_AD 8sct_AD 8scu_AD
reference complex4yfu_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYRNNYNQH

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  54   0  13   0
C |  16  96  13   0
G |  13   0  54   0
T |  13   0  16  96
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updated Fri Sep 13 04:18:00 2024