interface graph thumbnail
legend  pdf

structure nameOCT4/SOX2 PROTEIN:DNA COMPLEX
referenceChojnowski et al. 'To ? ? ?
experimentX-ray (resolution=3.14, R-factor=0.201)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyPou domain Nterminal to homeobox domain;
multimeric complexes3l1p_AB 6ht5_DE
reference complex8bx1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQTSR

Estimated binding specificities ?

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# IC=6.377 IC/col=0.709 n_of_columns=9 specificity:   
A |   8  96   0  16   0  16  24  24   8
C |   8   0   0   8  96   8  24  24   0
G |   0   0   0  64   0   8  24  24   8
T |  80   0  96   8   0  64  24  24  80
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updated Fri Sep 13 10:04:26 2024