8ox0_C : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF APO TELOMERIC NUCLEOSOME
reference	van Roon et al. 'Sci 9 eadi4148 2023
experiment	X-ray (resolution=2.52, R-factor=0.314)
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7pii_ABCDEFGH 8ox0_ABCDEFGH
redundant complexes	8ox1_C 7pii
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8ox0_C interface=2,33, aRakaksrssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk

  
  --RT                             +---------7jzv_N    
               +-------------------2 
  --RC         !                   !     +---6qld_f    
             +-3                   +-----1 
  LC--       ! !                         +---8bvw_e    
           --4 ! 
  --RT       ! +-----------------------------8com_C    
             ! 
  --RT       +-----------------------------7on1_e

home
updated Wed Dec 18 19:08:27 2024