| structure name | ELK-1/DNA STRUCTURE REVEALS HOW RESIDUES DISTAL FROM DNA-BINDING SURFACE AFFECT DNA-RECOGNITION (ETS-DOMAIN PROTEIN ELK-1) |
| reference | Marmorstein et al. Nat.Struct.Biol. 7 292 2000 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.10, R-factor=?) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Etsdomain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | DKSRRY |
Estimated binding specificities ?
| readout + contact |  |
A | 0 0 0 60 24 12 C | 84 0 0 12 24 12 G | 0 96 96 12 24 60 T | 12 0 0 12 24 12scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ELK-1 | ||
| CCGGAAGT | PubMed | 1dux_F(2.11e-03) |
Dendrogram of similar interfaces ?
matrix format----ECKT--RGATRGHTRA L +---4mhg_A +-1 ------KT--RG--RGYT-- L +-------------------2 +---4bqa_A ! ! ------KT--RG--RGYA-- L --3 +-----4l18_B ! ITRGECSCSGKG-------- L +-------------------------5i2d_R |
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updated Fri Sep 13 15:32:08 2024