| structure name | STRUCTURE OF A TRAPPED ENDONUCLEASE III-DNA COVALENT INTERMEDIATE: ESTRANGED-GUANINE COMPLEX (Endonuclease III) |
| reference | Verdine et al. 'Embo 22 3461 2003 |
| source | Geobacillus stearothermophilus |
| experiment | X-ray (resolution=1.70, R-factor=0.235) |
| structural superfamily | DNA-glycosylase; |
| sequence family | HhHGPD superfamily base excision DNA r; Helixhairpinhelix motif; Ironsulfur binding domain of endonucle; |
| redundant complexes | 1orp_A 1p59_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--QGCGTA--LC-------------------- +--------1orn_A +--------------2 --NG--RG----FGRC---------------- ! ! +------4ejy_A +-3 +-1 --LG----------KG---------------- ! ! +------3cw7_C +-4 ! NGRGTG----LG--LCRG-------------- ! ! +-----------------------4e9f_A --5 ! AGNG----RCFC----RG----------RATT ! +-------------------------3knt_A ! ------------------KTIAQCNART---- L +---------------------------1ig7_A |
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updated Fri Sep 13 15:54:51 2024