| structure name | CRYSTAL STRUCTURE OF METHANOCALDOCOCCUS JANNASCHII 8-OXOGUANINE GLYCOSYLASE/LYASE IN COMPLEX WITH 15MER DNA CONTAINING 8-OXOGUANINE (N-glycosylaseDNA lyase) |
| reference | Faucher et al. J.Mol.Biol. 397 46 2010 |
| source | Methanocaldococcus jannaschii |
| experiment | X-ray (resolution=2.70, R-factor=0.190) |
| structural superfamily | DNA-glycosylase; |
| sequence family | HhHGPD superfamily base excision DNA repair; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--AGNG--------RCFC------RGRATT------ +---------3knt_A +--------5 ----QTLAHGAT--------KT-------------- ! +---------3s6i_A ! ----NCNANARC----YGRC---------------- +-7 +-------2xhi_A ! ! +------3 --QGKGLGSGAGSC--LTKC---------------- ! ! ! ! +-4b21_A ! ! ! +-----2 ----NG--RG------FGRC---------------- ! +---6 +-4ejy_A ! ! ----QG----------YC------------------ L +-8 ! +-------7ef9_A ! ! +------4 ----------------YG------------ACCTRG ! ! ! +5kn8_A ! ! +-------1 ----QG----------YC------------------ +----9 ! +6u7t_A ! ! ! --NGRGTG--------LG----LCRG---------- ! ! +--------------------7kz0_A -10 ! --NGRGTG--------LG----LC------------ ! +----------------------6vjw_A ! YT----------RCRTLT----QT------------ +---------------------------7oue_G |
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updated Fri Sep 13 17:21:05 2024