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structure nameSTRUCTURE OF MBOGG1 IN COMPLEX WITH HIGH AFFINITY DNA LIGAND
(3-Methyladenine DNA glycosylase)
referenceZhang et al. J.Struct.Biol. 181 252 2013
sourceThermoanaerobacter tengcongensis
experimentX-ray (resolution=2.00, R-factor=0.224)
structural superfamilyDNA-glycosylase;TATA-box binding protein-like;
sequence family8oxoguanine DNA glycosylase, Nterminal dom; HhHGPD superfamily base excision DNA repair;
redundant complexes4ejz_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --NA--RA----FGRC------                                 +3i0w_A    
                                                       +-1 
  --NG--RG----FGRC------                         +-----4 +4ejy_A    
                                                 !     ! 
  --NCNANARC--YGRC------                      +--5     +-2xhi_A    
                                              !  ! 
  --LG--------KG--------              +-------7  +-------3cw7_C    
                                      !       ! 
  --QTLAHGAT----KT------              !       +----------3s6i_A    
                                   +--9 
  QGKGLGSGAGSCLTKC------           !  !         +--------4b21_A    
                                   !  !    +----6 
  --QG--QG--------------   L       !  !    !    +--------7ef9_A    
                                   !  +----8 
  ----------YG------ACRG       +--10       !             +5kn8_A    
                               !   !       +-------------2 
  --QG--RG--YC----------       !   !                     +6u7t_A    
                               !   !  
  NGRGTG----LG--LC------     -11   !                     +6vjw_A    
                               !   +---------------------3 
  NGRGTG----LG--LCRG----       !                         +7kz0_A    
                               !  
  --QGCGTA--LC----------       +-------------------------1orn_A    
                             

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updated Fri Sep 13 18:09:33 2024