| structure name | STRUCTURE OF THE GLYCOSYLASE DOMAIN OF MBD4 BOUND TO AP SITE CONTAINING DNA (Methyl-CpG-binding domain protein 4) |
| reference | Vigouroux et al. 'Nucleic 40 9917 2012 |
| source | Homo sapiens |
| experiment | X-ray (resolution=1.79, R-factor=0.216) |
| structural superfamily | DNA-glycosylase; |
| redundant complexes | 4e9g 4e9h 4ea4 4ea5 |
| reference complex | 4ofa_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix formatNGRGTG------LG----LCRG------------ +--------7kz0_A +----5 --QG--QG----YC-------------------- L ! +--------7ef9_A +--------6 ------------YG-------------------- ! ! +5kn8_A ! +-------------1 --QG--RG----YC-------------------- +---7 +6u7t_A ! ! QGKGLGSGAGSC--LTKC---------------- ! ! +-4b21_A ! ! +-2 --NG--RG--------FGRC-------------- ! +-------------------3 +-4ejy_A ! ! --NCNANARC------YGRC-------------- +-10 +--2xhi_A ! ! NGRGTG------LG----LC-------------- ! ! +------6vjw_A ! ! +----------------4 --QTLAHGAT----------KT------------ ! ! +-8 +------3s6i_A +-11 ! ! ! ----------------------RTVAITNAMCRG L ! ! +-9 +-----------------------1yrn_A ! ! ! --RT--------------------NCSTNARG-- L -12 ! +-------------------------1mnm_C ! ! ------------------------VAQTNA---- L ! +-----------------------------1fjl_B ! ------------------------NT--NAIARG L +-----------------------------1b72_B |
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updated Thu Sep 12 19:08:11 2024