| structure name | DETAILED STRUCTURAL INSIGHT INTO THE QUINOLONE-DNA CLEAVAGE COMPLEX OF TYPE IIA TOPOISOMERASES (DNA TOPOISOMERASE 4 SUBUNIT B) |
| reference | Sanderson et al. |
| source | STREPTOCOCCUS PNEUMONIAE |
| experiment | X-ray (resolution=2.90, R-factor=0.187) |
| structural superfamily | Type II DNA topoisomerase; |
| sequence family | DNA gyrase B subunit, carboxyl terminus; Toprim domain; |
| multimeric complexes | 3foe_AC 3foe_BD 3fof_ABCD 3k9f_AC 3k9f_BD 3ksa_ABCD 3ksb_ABCD 3ltn_ABCD 3rad_AC 3rad_BD 3rae_ABCD 3raf_AC 3raf_BD 4koe_ABCD 4kpe_ABCD 4kpf_AC 4kpf_BD |
| redundant complexes | 3ksb_C 3rad_C 3raf_D 4kpe_C 4kpf_D 3foe 3fof 3ksa 3ltn 3rae 4koe |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix formatKT---- +3k9f_C +-1 KT---- L ! +4z4q_B +---3 KT---- L ! ! +2xkk_C ! +-2 KA---- +-------------6 +2xcr_U ! ! KA---- L ! ! +-4fm9_A +----8 +--4 KT---- ! ! +-3l4j_A ! ! KT---- +-10 +------------------5bs8_D ! ! KT---- ! ! +-----------------4juo_C ! +-----7 KG---- -11 +-----------------5iwi_D ! KT---- ! +---4z2c_D ! +----------------5 KT--KA L +----9 +---6waa_D ! KAKC-- +--------------------6rku_D |
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updated Tue Dec 19 07:43:23 2023