interface graph thumbnail
legend  pdf

structure nameQUINOLONE(MOXIFLOXACIN)-DNA CLEAVAGE COMPLEX OF GYRASE FROM S. PNEUMONIAE
(DNA GYRASE SUBUNIT B)
referenceCrevel et al. 'To ? ? ?
sourceSTREPTOCOCCUS PNEUMONIAE
experimentX-ray (resolution=3.19, R-factor=0.226)
structural superfamilyType II DNA topoisomerase;
sequence familyDNA gyrase B subunit, carboxyl terminus; Toprim domain;
multimeric complexes4z2c_AD 4z2c_BC 4z2d_ABCD 4z2e_AD 4z2e_BC
redundant complexes4z2d_D 4z2e_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --KT------                                    +4z2c_D    
                                        +-------2 
  --KT------                            !       +5bs8_D    
                             +----------6 
  --KG------                 !          !        +5iwi_D    
                             !          +--------1 
  --KA------                 !                   +2xcr_U    
                         +---8 
  --KT------   L         !   !               +---4z4q_B    
                         !   !    +----------4 
  --KT----KA   L         !   !    !          +---6waa_D    
                      +--9   +----7 
  --KT------          !  !        !            +-3k9f_C    
                      !  !        +------------3 
  --KA------   L   +-10  !                     +-4fm9_A    
                   !  !  ! 
  --KA--KC--       !  !  +-----------------------6rku_D    
                 -11  !  
  --KT------       !  +--------------------------4juo_C    
                   !  
  HC--DG----       !                       +---6pcm_B    
                   +-----------------------5 
  ----DC----   L                           +---6cqi_A    
                 

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updated Tue Dec 19 09:49:05 2023