| structure name | N-TERMINAL DOMAIN OF THE CI REPRESSOR FROM BACTERIOPHAGE TP901-1 IN COMPLEX WITH THE OL2 OPERATOR HALF-SITE (CI) |
| reference | Rasmussen et al. Biochemistry 52 6892 2013 |
| source | LACTOCOCCUS PHAGE TP901-1 |
| experiment | X-ray (resolution=2.60, R-factor=0.201) |
| structural superfamily | lambda repressor-like DNA-binding domains; |
| sequence family | Helixturnhelix; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KSTSQQ |
Estimated binding specificities ?
| contact |  |
A | 3 3 0 44 46 0 C | 87 3 0 13 20 96 G | 3 5 96 20 17 0 T | 3 85 0 19 13 0scan! |
Dendrogram of similar interfaces ?
matrix format--QT--STNTVTATSTQTRTETTT---- L +2r1j_L +-1 ----ATATTTPTTTNT------------ L +-----3 +6fix_D ! ! ----RTTT--AT--STRG----TT---- L ! +6chv_D +-----------5 ----AT--QAAT--SA------------ ! ! +4z5h_A ! ! +----2 ----STKCQAAT--SA------------ L --6 +-4 +3dnv_B ! ! RT--------RG----NT----ETRTYA L ! +----7f9h_B ! ------SGKGSCQTSTRG---------- L +------------------6w1a_A |
home
updated Fri Sep 13 17:59:59 2024