| structure name | CRYSTAL STRUCTURE OF STREPTOCOCCUS DYSGALACTIAE SHP PHEROMONE RECEPTOR RGG2 BOUND TO DNA (Transcriptional regulator) |
| reference | Capodagli et al. Proc.Natl.Acad.Sci.USA 117 24494 2020 |
| source | Streptococcus dysgalactiae |
| experiment | X-ray (resolution=2.80, R-factor=0.236) |
| structural superfamily | lambda repressor-like DNA-binding domains; |
| sequence family | Helixturnhelix; |
| multimeric complexes | 6w1a_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SKSQSR |
Estimated binding specificities ?
| contact |  |
A | 0 16 0 57 C | 96 54 96 13 G | 0 13 0 13 T | 0 13 0 13scan! |
Dendrogram of similar interfaces ?
matrix format----SGKGSCQTSTRG------ L +6w1a_A +----------2 --CTSGKTSGQTSTRC------ L +-----4 +6w1f_A ! ! ----HCQASTETSARG----VT L +------5 +----------3u3w_B ! ! ----TT--RGQTIT-------- L ! +----------------5jub_B +----6 ----STNTVTATSTQTRTETTT L ! ! +2r1j_L ! ! +-1 AT--ATTTPTTTNT-------- L --7 +---------------------3 +6fix_D ! ! ----AAKGSGYGST--RTQG-- L ! +-3zkc_A ! ------KGSGTTSTQC----QG L +----------------------------3zhm_A |
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updated Sat Sep 14 00:17:54 2024