| structure name | Y-FAMILY DNA POLYMERASE CHIMERA DBH-DPO4-DPO4 #1 |
| reference | Wilson et al. Structure 21 20 2013 |
| experiment | X-ray (resolution=1.90, R-factor=0.187) |
| structural superfamily | DNA/RNA polymerases;Lesion bypass DNA polymerase Y-family, little finger domain; |
| sequence family | impB/mucB/samB family; |
| redundant complexes | 4f4x_A 4f50_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format----VG----AGAG------PC------MG----------------IC------HA--LCST----RGRG +4f4w_A +-1 ----VG----AG--------PCIAKAQA------------KC----YC----------LCST----RC-- +-2 +4f4y_B ! ! ----------AC----AG------------------------ST--YG----RG----LC------RCKT +-4 +4f4z_A ! ! ----------VASA----AAPT--MT--------------------EG----RT----FT----RT---- +-6 +5yuy_A ! ! ----------MASA----AAPC--IC--------------------EG------------TG------RG +---7 +-2oh2_B ! ! FCYC----------TTAT------------SCICDCEC----ST----------------SG----RCRT ! ! +-4tqr_A +---8 +-5 ----------EG--------FG------------------------ETYG------HG------------ ! ! +-3gqc_A +------9 ! ----------MA--------PAFAIA--------------------EC----------FTTG-------- ! ! +------7nv0_A +------10 ! ----QTWA----IT------------------------------ST----TA----------RC------ ! ! +----------7m7n_A ! ! --------ST----------WG------------------------DTWC------MG------------ +-11 +-----------------6x6z_A ! ! --------------------------------------RT------------------------------ ! ! +3n4m_B -12 +-------------------------3 --------------------------------------RA------------------------------ ! +6b6h_I ! --------------------------------------RG------------------------------ +--------------------------5tw1_T |
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updated Fri Sep 13 18:10:38 2024