| structure name | REV1 TERNARY COMPLEX WITH DCTP AND CA2+ (DNA repair protein REV1) |
| reference | Freudenthal et al. Proc.Natl.Acad.Sci.USA 117 25494 2020 |
| source | Saccharomyces cerevisiae |
| experiment | X-ray (resolution=1.40, R-factor=0.187) |
| structural superfamily | DNA/RNA polymerases;Lesion bypass DNA polymerase Y-family, little finger domain; |
| sequence family | impB/mucB/samB family; |
| redundant complexes | 2aq4_A 3bjy_A 3osp_A 5wm1_A 5wm8_A 5wmb_A 6x70_A 6x71_A 6x72_A 6x73_A 6x74_A 6x75_A 6x76_A 6x77_A 7t18_A 7t19_A 7t1a_A 7t1b_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--YCHCLCLGSC----HTST----------WG----------------------DTWC--------KGYAMG---------------- +----6x6z_A +--6 NA--HALGIGSG--------EG--------FG----------------------ETYG------TGKGFTHG---------------- ! +----3gqc_A ! --------------------VASA----AAPT--MT------------------EG----RT------------FT------RT---- ! +-5yuy_A ! ! --------------------AGAG------PC----MG----------------IC------HA----------LC--ST----RGRG ! +-3 +4f4w_A +--8 ! ! +-1 --------------------AG--------PCIAKA------------KC----YC------------------LC--ST----RC-- ! ! ! +-2 +4f4y_B ! ! +-4 ! --------------------AC----AG----------------------ST--YG----RG------------LC--------RCKT ! ! ! ! +4f4z_A ! ! +---5 ! --------------------MASA----AAPC--IC------------------EG----------------------TG-------- +-------9 ! ! ! +-2oh2_B ! ! +-7 ! ------------FCYC--------TTAT----------SCICDCEC----ST--------------------------SG----RCRT ! ! ! +--4tqr_A ! ! ! --------------------MA--------PAFAIA------------------EC------------------FT--TG-------- +------10 ! +------7nv0_A ! ! ! ----------------QT----IT----------------------------------TA------------------RC-------- ! ! +----------7m7n_A +-11 ! --------------YG------------------------------------EG--------RA------------------------ ! ! +------------------3osn_A -12 ! ----------------------------------------------RT---------------------------------------- ! +--------------------------3n4m_B ! ----------------------------------------------------NG------------------YA--RC--ST------ +---------------------------3mfi_A |
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updated Sat Sep 14 00:45:22 2024