| structure name | DNA POLYMERASE IV - DNA TERNARY COMPLEX 9 (DNA polymerase IV) |
| reference | Kottur et al. 'Nucleic 46 5875 2018 |
| source | Escherichia coli K-12 |
| experiment | X-ray (resolution=1.74, R-factor=0.190) |
| structural superfamily | DNA/RNA polymerases;Lesion bypass DNA polymerase Y-family, little finger domain; |
| sequence family | impB/mucB/samB family; |
| redundant complexes | 4ir1_F 4ir9_F 4irc_F 4ird_F 4irk_A 4q43_F 4q45_A 5yuw_A 5yuz_A 5yv0_A 5yv1_F 5yv2_A 5yv3_F 5zlv_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--------VASA----AAPT--MT--------------------EG----RT----FT--RT---- +-5yuy_A ! ----VG--AG--------PCIAKAQA------------KC----YC----------LCST--RC-- +-4 +4f4y_B ! ! +-1 --------AC----AG------------------------ST--YG----RG----LC----RCKT ! +-2 +4f4z_A +-5 ! ----VG--AGAG------PC------MG----------------IC------HA--LCST--RGRG ! ! +4f4w_A +---6 ! --------MASA----AAPC--IC--------------------EG------------TG----RG ! ! +-2oh2_B +---7 ! --------EG--------FG------------------------ETYG------HG---------- ! ! +---3gqc_A +-8 ! FCYC--------TTAT------------SCICDCEC----ST----------------SG--RCRT ! ! +-------4tqr_A +-------9 ! --------MA--------PAFAIA--------------------EC----------FTTG------ ! ! +-----------7nv0_A +---10 ! ------QT--IT------------------------------ST----TA--------RC------ ! ! +-------------7m7n_A ! ! --YG----------------------------------------EG------RA------------ +-11 +---------------------3osn_A ! ! ------------------------------------RT---------------------------- ! ! +3n4m_B +-12 +-------------------------3 ------------------------------------RA---------------------------- ! ! +6b6h_I -13 ! ------------------------------------RG---------------------------- ! +---------------------------5tw1_T ! ------------------------------------RT---------------------------- +-----------------------------5vi8_T |
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updated Tue Dec 19 12:03:00 2023