| structure name | THE CRYO-EM STRUCTURE OF THE PALINDROMIC DNA-BOUND USP-ECR NUCLEAR RECEPTOR REVEALS AN ASYMMETRIC ORGANIZATION WITH ALLOSTERIC DOMAIN POSITIONING (ECDYSONE RECEPTOR) |
| reference | Billas et al. Nat.Commun. 5 4139 2014 |
| source | HELIOTHIS VIRESCENS |
| experiment | X-ray (resolution=11.60, R-factor=?) |
| structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | Zinc finger, C4 type two domains; |
| multimeric complexes | 4umm_AE |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format----EAKG--RTRTRT-- +4umm_E +-------1 ----EAKG--RTRTRT-- ! +2han_B +--13 ------KGVT--RG---- L ! ! +2c7a_B ! +-------9 ------KGVT--RG---- ! ! +1r4i_A +-----14 +-6 ----ECKG--KGRG---- ! ! +3dzy_A ! ! CA--ECKG--KGRG---- L ! ! +--6l6q_B ! +-------12 ------KAVA--RA---- L ! ! +5e69_A ! +--2 ----ECKG--KGRG--RC L ! +2ff0_A +-18 ------KGVT--RG---- L ! ! +6x6e_A ! ! +-------------3 ----DAKG--RGRG---- L ! ! ! +4iqr_B ! ! +-15 ------KGVG--RG---- L ! ! ! ! +4tnt_B ! ! ! ! +-4 ----ETKGAT--RG---- L ! ! ! +-------------7 +1lat_A +-19 +--16 ! ----ECKG--RGRG---- L ! ! ! +3dzy_D ! ! ! ----ECKGAGKGRG---- L ! ! ! +-1hcq_E ! ! +-----------10 ----ECKG--RGRG---- L ! ! +-5uan_B ! ! --HC--KGVT--RG--RT -20 ! +-3g9m_B ! +----------------11 ----ECKGAG--RG---- L ! ! +4ond_A ! +-5 ------KGVT--RG---- ! +5emp_A ! ----EAKG--RTRG---- L ! +1kb2_B ! +----------------8 ----ECKA--RGRG---- L +----17 +4nqa_I ! ----ECKG--KGRA--RT L +----------------5l0m_A |
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updated Fri Sep 13 18:48:21 2024