interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameNUCLEOSOME DISASSEMBLY BY RSC AND SWI/SNF IS ENHANCED BY H3 ACETYLATION NEAR THE NUCLEOSOME DYAD AXIS
(HISTONE H3.2)
referenceBartholomew et al. Mol.Cell.Biol. 35 4083 2015
sourceXENOPUS LAEVIS
experimentX-ray (resolution=2.40, R-factor=?)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes4xzq_ABCDEFGH 4ys3_ABCDEFGH 4z66_ABCDEFGH
redundant complexes4ys3 4z66
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  RG--------                                +8jh2_e    
                             +--------------2 
  RG--RT----       +---------5              +8grq_A    
                   !         ! 
  RGLCRT----       !         +---------------8hr1_E    
                   !  
  ----RA----       !                         +--7xsx_a    
                   !           +-------------4 
  ------RA--       !       +---6             +--6g0l_D    
                 -11       !   ! 
  ----RG----       !    +--8   +----------------8ox0_C    
                   !    !  ! 
  ----RG----       !  +-9  +--------------------5x0y_G    
                   !  ! ! 
  ----RG----       !  ! +-----------------------8jla_C    
                   !  !  
  ----RG----       +-10                         +8txv_G    
                      !                       +-1 
  ----RA----          !   +-------------------3 +1zla_C    
                      !   !                   ! 
  ----RA--RA          +---7                   +6a5l_g    
                          ! 
  ----RT----              +--------------------8u14_G    
                 

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updated Sun Aug 3 08:39:28 2025