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structure nameSTRUCTURAL BASIS OF THE RECOGNITION OF H3K36ME3 BY DNMT3B PWWP DOMAIN
(Modification methylase HhaI)
referenceRondelet et al. J.Struct.Biol. 194 357 2016
sourceHaemophilus parahaemolyticus
experimentX-ray (resolution=1.59, R-factor=0.166)
structural superfamilyS-adenosyl-L-methionine-dependent methyltransferases;
sequence familyC5 cytosinespecific DNA methylase;
redundant complexes10mh_A 1m0e_A 1mht_A 1skm_A 2c7o_A 2c7p_A 2c7q_A 2c7r_A 2hr1_A 2uyc_A 2uyh_A 2uz4_A 2z6a_A 2z6u_A 2zcj_A 3eeo_A 3mht_A 4mht_A 5mht_A 6mht_A 7mht_A 8mht_A 9mht_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  NAFA------------------------VA----              +------------------------2y7h_B    
                                             +----2 
  ------------------------------VA--   L     !    !           +------------5hr4_C    
                                           +-3    +-----------1 
  NA----YA----------------YA--------   L   ! !                +------------8cxy_C    
                                         --4 ! 
  ----------------AAEA--------------       ! +-----------------------------2bgw_A    
                                           ! 
  ----CC--NAVGNGPG----ECNC--VCRCRCRC   L   +-----------------------------6kdb_D    
                                         

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updated Mon Jun 29 19:30:37 2026