interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF TRANSCRIPTION FACTOR FLI1 IN COMPLEX WITH AN 11-MER DNA GACCGGAAGTG
(Friend leukemia integration 1 transcription factor)
referenceTsodikov et al. 'Nucleic 44 8990 2016
sourceHomo sapiens
experimentX-ray (resolution=3.10, R-factor=0.196)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureDKRARYK

Estimated binding specificities ?

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# IC=4.007 IC/col=0.801 n_of_columns=5 specificity:   
A |   9  11   0   0   9
C |   9   9  96  96  11
G |   9   9   0   0  67
T |  69  67   0   0   9
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updated Tue Dec 17 02:04:47 2024