interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF ASPA-26MER DNA COMPLEX
referenceScience 349 1120 2015
experimentX-ray (resolution=3.20, R-factor=0.260)
structural superfamily"Winged helix" DNA-binding domain;
multimeric complexes5k1y_ABCDEF 5k5o_ABCD 5k5q_ABCDEF 5k5r_ABCDEF 5kk1_ABCDEF
reference complex5k5q_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYQTIQR

Estimated binding specificities ?

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# IC=6.292 IC/col=0.899 n_of_columns=7 specificity:   
A |   9   0   7   7   0  96   7
C |   7  96   9   9   0   0  75
G |   7   0  73   7  96   0   7
T |  73   0   7  73   0   0   7
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updated Thu Sep 12 21:38:20 2024