| structure name | STRUCTURE OF ASPA-DNA COMPLEX: NOVEL CENTROMERE BINDNG PROTEIN- CENTROMERE COMPLEX (ASPA) |
| reference | Science 349 1120 2015 X-RAY DIFFRACTION |
| source | SULFOLOBUS SP. NOB8H2 |
| experiment | X-ray (resolution=2.65, R-factor=0.262) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| multimeric complexes | 5k1y_ABCDEF 5k5o_ABCD 5k5q_ABCDEF 5k5r_ABCDEF 5kk1_ABCDEF |
| redundant complexes | 5k1y_E
5k5o_B
5k5r_E
 5kk1_D
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KYQTQ |
Estimated binding specificities ?
| contact |  |
A | 0 96 0 13 96 0 54 C | 0 0 0 54 0 0 16 G | 96 0 96 16 0 0 13 T | 0 0 0 13 0 96 13scan! |
Dendrogram of similar interfaces ?
matrix format--------RGSTRTSTHG----------------RA---- L +3zpl_B +---------------------------1 ------DCLT--AGTTRG------RG--------RA---- L ! +5h3r_A ! ----------------NAST--HT--STLT---------- L +-5 +------7cby_C ! ! +-2 --------------NAST--RTHT--ST------------ L ! ! +-------------3 +------3l2c_A ! ! ! ! ----LANTHGTTETYTRG---------------------- L +-6 +----4 +--------1f4k_B ! ! ! --TT------KATTQTTG----LTRT----KA----FTYT L ! ! +----------------------2p7c_B +-7 ! ------SG--PTPGTT----------------HG------ L ! ! +-----------------------------7d98_Q +-8 ! ----------------------YG---------------- ! ! +-----------------------------3eyi_B --9 ! RC----EGRTRGRGYT------------------------ L ! +-----------------------------4yo2_A ! ----------NCTTNA------VTNT-------------- L +-----------------------------1pp7_U |
home
updated Fri Sep 13 19:57:56 2024