interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF PNOB8 ASPA-DNA COMPLEX.
(ASPA)
referenceStructures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
sourceSULFOLOBUS SP. NOB8H2
experimentX-ray (resolution=3.38, R-factor=0.219)
structural superfamily"Winged helix" DNA-binding domain;
multimeric complexes5k1y_ABCDEF 5k5o_ABCD 5k5q_ABCDEF 5k5r_ABCDEF 5kk1_ABCDEF
reference complex5k5q_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKYQTIQR

Estimated binding specificities ?

readout + contactlogo
# IC=8.044 IC/col=1.005 n_of_columns=8 specificity:   
A |   9  69   0   0  96   0  96  11
C |   9   9   0  96   0   0   0   9
G |  69   9  96   0   0   0   0   9
T |   9   9   0   0   0  96   0  67
scan!

home
updated Thu Sep 12 21:42:44 2024